-#!/bin/bash -exu
+#!/bin/bash
#
-# Copyright (C) 2015 Jonathan Rajotte-Julien <jonathan.rajotte-julien@efficios.com>
-# Copyright (C) 2019 Michael Jeanson <mjeanson@efficios.com>
-#
-# This program is free software: you can redistribute it and/or modify
-# it under the terms of the GNU General Public License as published by
-# the Free Software Foundation, either version 3 of the License, or
-# (at your option) any later version.
-#
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-# GNU General Public License for more details.
-#
-# You should have received a copy of the GNU General Public License
-# along with this program. If not, see <http://www.gnu.org/licenses/>.
+# SPDX-FileCopyrightText: 2015 Jonathan Rajotte-Julien <jonathan.rajotte-julien@efficios.com>
+# SPDX-FileCopyrightText: 2016-2023 Michael Jeanson <mjeanson@efficios.com>
+# SPDX-License-Identifier: GPL-2.0-or-later
+
+set -exu
# Version compare functions
vercomp () {
return 0
fi
local IFS=.
+ # Ignore the shellcheck warning, we want splitting to happen based on IFS.
+ # shellcheck disable=SC2206
local i ver1=($1) ver2=($2)
# fill empty fields in ver1 with zeros
for ((i=${#ver1[@]}; i<${#ver2[@]}; i++)); do
[ "$res" -ne "0" ]
}
-# Required parameters
-arch=${arch:-}
+print_header() {
+ set +x
+
+ local message=" $1 "
+ local message_len
+ local padding_len
+
+ message_len="${#message}"
+ padding_len=$(( (80 - (message_len)) / 2 ))
+
+ printf '\n'; printf -- '#%.0s' {1..80}; printf '\n'
+ printf -- '-%.0s' {1..80}; printf '\n'
+ printf -- '#%.0s' $(seq 1 $padding_len); printf '%s' "$message"; printf -- '#%.0s' $(seq 1 $padding_len); printf '\n'
+ printf -- '-%.0s' {1..80}; printf '\n'
+ printf -- '#%.0s' {1..80}; printf '\n\n'
+
+ set -x
+}
+
+failed_configure() {
+ # Assume we are in the configured build directory
+ print_header "BEGIN config.log"
+ cat config.log
+ print_header "END config.log"
+
+ # End the build with failure
+ exit 1
+}
+
+print_header "Librseq build script starting"
+
+# Required variables
+WORKSPACE=${WORKSPACE:-}
+
+# Axis
+platform=${platform:-}
conf=${conf:-}
build=${build:-}
cc=${cc:-}
+# Build steps that can be overriden by the environment
+LIBRSEQ_MAKE_INSTALL="${LIBRSEQ_MAKE_INSTALL:-yes}"
+LIBRSEQ_MAKE_CLEAN="${LIBRSEQ_MAKE_CLEAN:-yes}"
+LIBRSEQ_GEN_COMPILE_COMMANDS="${LIBRSEQ_GEN_COMPILE_COMMANDS:-no}"
+LIBRSEQ_RUN_TESTS="${LIBRSEQ_RUN_TESTS:-yes}"
SRCDIR="$WORKSPACE/src/librseq"
TMPDIR="$WORKSPACE/tmp"
-PREFIX="$WORKSPACE/build"
+PREFIX="/build"
+LIBDIR="lib"
+LIBDIR_ARCH="$LIBDIR"
+
+# RHEL and SLES both use lib64 but don't bother shipping a default autoconf
+# site config that matches this.
+if [[ ( -f /etc/redhat-release || -f /etc/products.d/SLES.prod || -f /etc/yocto-release ) ]]; then
+ # Detect the userspace bitness in a distro agnostic way
+ if file -L /bin/bash | grep '64-bit' >/dev/null 2>&1; then
+ LIBDIR_ARCH="${LIBDIR}64"
+ fi
+fi
-# Create build and tmp directories
-rm -rf "$PREFIX" "$TMPDIR"
-mkdir -p "$PREFIX" "$TMPDIR"
+exit_status=0
+
+# Use bear to generate compile_commands.json when enabled
+BEAR=""
+if [ "$LIBRSEQ_GEN_COMPILE_COMMANDS" = "yes" ]; then
+ BEAR="bear"
+fi
+
+# Create tmp directory
+rm -rf "$TMPDIR"
+mkdir -p "$TMPDIR"
export TMPDIR
export CFLAGS="-g -O2"
+export CXXFLAGS="-g -O2"
+
+# Add the convenience headers in extra to the
+# include path.
export CPPFLAGS="-I$SRCDIR/extra"
# Set compiler variables
export CC=gcc
export CXX=g++
;;
-gcc-4.8)
- export CC=gcc-4.8
- export CXX=g++-4.8
- ;;
-gcc-5)
- export CC=gcc-5
- export CXX=g++-5
- ;;
-gcc-6)
- export CC=gcc-6
- export CXX=g++-6
- ;;
-gcc-7)
- export CC=gcc-7
- export CXX=g++-7
- ;;
-gcc-8)
- export CC=gcc-8
- export CXX=g++-8
+gcc-*)
+ export CC=gcc-${cc#gcc-}
+ export CXX=g++-${cc#gcc-}
;;
clang)
export CC=clang
export CXX=clang++
;;
-clang-3.9)
- export CC=clang-3.9
- export CXX=clang++-3.9
- ;;
-clang-4.0)
- export CC=clang-4.0
- export CXX=clang++-4.0
- ;;
-clang-5.0)
- export CC=clang-5.0
- export CXX=clang++-5.0
- ;;
-clang-6.0)
- export CC=clang-6.0
- export CXX=clang++-6.0
- ;;
-clang-7)
- export CC=clang-7
- export CXX=clang++-7
+clang-*)
+ export CC=clang-${cc#clang-}
+ export CXX=clang++-${cc#clang-}
;;
*)
if [ "x$cc" != "x" ]; then
esac
# Set platform variables
-case "$arch" in
+case "$platform" in
*)
export MAKE=make
export TAR=tar
export NPROC=nproc
+ export PYTHON="python3"
+ export PYTHON_CONFIG="python3-config"
;;
esac
+# Print build env details
+print_header "Build environment details"
+print_hardware || true
+print_os || true
+print_tooling || true
+
# Enter the source directory
cd "$SRCDIR"
# Run bootstrap in the source directory prior to configure
+print_header "Bootstrap autotools"
./bootstrap
# Get source version from configure script
eval "$(grep '^PACKAGE_VERSION=' ./configure)"
-
-TARBALL_FILE="librseq-$PACKAGE_VERSION.tar.bz2"
+PACKAGE_VERSION=${PACKAGE_VERSION//\-pre*/}
# Set configure options and environment variables for each build
# configuration.
-CONF_OPTS=""
+CONF_OPTS=("--prefix=$PREFIX" "--libdir=$PREFIX/$LIBDIR_ARCH" "--disable-maintainer-mode")
case "$conf" in
static)
- echo "Static build"
- CONF_OPTS="--enable-static --disable-shared"
+ print_header "Conf: Static lib only"
+
+ CONF_OPTS+=("--enable-static" "--disable-shared")
;;
*)
- echo "Standard build"
- CONF_OPTS=""
+ print_header "Conf: Standard"
;;
esac
# Build type
-# oot : out-of-tree build
-# dist: build via make dist
-# * : normal tree build
+# oot : out-of-tree build
+# dist : build via make dist
+# oot-dist: build via make dist out-of-tree
+# * : normal tree build
#
-# Make sure to move to the build_path and configure
-# before continuing
-BUILD_PATH=$SRCDIR
+# Make sure to move to the build directory and run configure
+# before continuing.
case "$build" in
oot)
- echo "Out of tree build"
- BUILD_PATH=$WORKSPACE/oot
- mkdir -p "$BUILD_PATH"
- cd "$BUILD_PATH"
- "$SRCDIR/configure" --prefix="$PREFIX" $CONF_OPTS
+ print_header "Build: Out of tree"
+
+ # Create and enter a temporary build directory
+ builddir=$(mktemp -d)
+ cd "$builddir"
+
+ "$SRCDIR/configure" "${CONF_OPTS[@]}" || failed_configure
;;
dist)
- echo "Distribution out of tree build"
- BUILD_PATH=$(mktemp -d)
+ print_header "Build: Distribution In-tree"
+
+ # Run configure and generate the tar file
+ # in the source directory
+ ./configure || failed_configure
+ $MAKE dist
+
+ # Create and enter a temporary build directory
+ builddir=$(mktemp -d)
+ cd "$builddir"
+
+ # Extract the distribution tar in the build directory,
+ # ignore the first directory level
+ $TAR xvf "$SRCDIR"/*.tar.* --strip 1
+
+ # Build in extracted source tree
+ ./configure "${CONF_OPTS[@]}" || failed_configure
+ ;;
- # Initial configure and generate tarball
- "$SRCDIR/configure"
+oot-dist)
+ print_header "Build: Distribution Out of tree"
+
+ # Create and enter a temporary build directory
+ builddir=$(mktemp -d)
+ cd "$builddir"
+
+ # Run configure out of tree and generate the tar file
+ "$SRCDIR/configure" || failed_configure
$MAKE dist
- mkdir -p "$BUILD_PATH"
- cp "./$TARBALL_FILE" "$BUILD_PATH/"
- cd "$BUILD_PATH"
+ dist_srcdir="$(mktemp -d)"
+ cd "$dist_srcdir"
- # Ignore level 1 of tar
- $TAR xvf "$TARBALL_FILE" --strip 1
+ # Extract the distribution tar in the new source directory,
+ # ignore the first directory level
+ $TAR xvf "$builddir"/*.tar.* --strip 1
- "$BUILD_PATH/configure" --prefix="$PREFIX" $CONF_OPTS
+ # Create and enter a second temporary build directory
+ builddir="$(mktemp -d)"
+ cd "$builddir"
+
+ # Run configure from the extracted distribution tar,
+ # out of the source tree
+ "$dist_srcdir/configure" "${CONF_OPTS[@]}" || failed_configure
;;
*)
- echo "Standard in-tree build"
- "$BUILD_PATH/configure" --prefix="$PREFIX" $CONF_OPTS
+ print_header "Build: Standard In-tree"
+
+ ./configure "${CONF_OPTS[@]}" || failed_configure
;;
esac
+# We are now inside a configured build directory
+
# BUILD!
-$MAKE -j "$($NPROC)" V=1
-$MAKE install
+print_header "BUILD!"
+$BEAR ${BEAR:+--} $MAKE -j "$($NPROC)" V=1
+
+# Install in the workspace if enabled
+if [ "$LIBRSEQ_MAKE_INSTALL" = "yes" ]; then
+ print_header "Install"
-# Run tests
-$MAKE --keep-going check
+ $MAKE install V=1 DESTDIR="$WORKSPACE"
-# Cleanup
-$MAKE clean
+ # Cleanup rpath in executables and shared libraries
+ #find "$WORKSPACE/$PREFIX/bin" -type f -perm -0500 -exec chrpath --delete {} \;
+ find "$WORKSPACE/$PREFIX/$LIBDIR_ARCH" -name "*.so" -exec chrpath --delete {} \;
-# Cleanup rpath in executables and shared libraries
-find "$PREFIX/lib" -name "*.so" -exec chrpath --delete {} \;
+ # Remove libtool .la files
+ find "$WORKSPACE/$PREFIX/$LIBDIR_ARCH" -name "*.la" -delete
+fi
-# Remove libtool .la files
-find "$PREFIX/lib" -name "*.la" -exec rm -f {} \;
+# Run tests if enabled
+if [ "$LIBRSEQ_RUN_TESTS" = "yes" ]; then
+ print_header "Run test suite"
-# Cleanup temp directory of dist build
-if [ "$build" = "dist" ]; then
- cd "$SRCDIR"
- rm -rf "$BUILD_PATH"
+ # Run tests, don't fail now, we want to run the archiving steps
+ $MAKE --keep-going check || exit_status=1
+
+ # Copy tap logs for the jenkins tap parser before cleaning the build dir
+ rsync -a --exclude 'test-suite.log' --include '*/' --include '*.log' --exclude='*' tests/ "$WORKSPACE/tap"
+
+ # Copy the test suites top-level log which includes all tests failures
+ rsync -a --include 'test-suite.log' --include '*/' --exclude='*' tests/ "$WORKSPACE/log"
+fi
+
+# Clean the build directory
+if [ "$LIBRSEQ_MAKE_CLEAN" = "yes" ]; then
+ print_header "Clean"
+ $MAKE clean
fi
+print_header "Librseq build script ended with: $(test $exit_status == 0 && echo SUCCESS || echo FAILURE)"
+
+# Exit with failure if any of the tests failed
+exit $exit_status
+
# EOF
+# vim: expandtab tabstop=4 shiftwidth=4